Chhak, K.C., E. Di Lorenzo, P.F. Cummins and N. Schneider. 2009. Forcing of low-frequency ocean variability in the Northeast Pacific. Journal of Climate. Accepted

Cullen, J., M. Chong and D. Ianson. 2009. The British Columbian continental shelf as a source of dissolved iron to the subarctic northeast Pacific Ocean. Global Biogeochemical Cycles. Under review. 

Dallimore, A ., R.J. Enkin, J. Peinitz, J. Southon, J. Baker, C.A. Wright, T. Pedersen, S.E. Calvert and R.E. Thomson. 2009. Post-glacial evolution of a Pacific coastal fjord in British Columbia, Canada: interactions of sea-level change, crustal response, and environmental fluctuations based on MONA Core MD02-2494. Quaternary Science. In press.

Falkner, K.K., M.C. O'Brien, E. Carmack, F. McLaughlin, H. Melling, A. Münchow and E.P.Jones. 2007. Implications of nutrient variability in passages of the Canadian Archipelago and Baggin Bay for fresh water through-flow an  local productivity. Journal of Geophysical Research. In Revision.

Farrell, A.P, Friesen, E., Tang, S, Higgs, D. and Ikonomou, M.G. 2009. Towards Improved Public Confidence in Farmed Fish Quality: a Canadian perspective. J. of the World Aquaculture Soc. In press.

Foreman, M.G.G., J.Y. Cherniawsky and V.A. Ballantyne. 2009. Versatile harmonic tidal analysis: improvements and applications. J. Atmospheric and Ocean Tech. Accepted. doi:10.1175/2008JTECHO615.1

Fine, I.V., J.Y. Cherniawsky, A.B. Rabinovich and F.E. Stephensen. 2009. Numerical modeling and observations of tsunami waves in Alberni Inlet and Barkley Sound, British Columbia. Pure and Applied Geophysics. Accepted.

Freeland, H.J. 2009. Argo - an ocean observing network. Encyclopaedia of Earth Sciences. McGraw Hill. In press.

Freeland, H.J. and D. Gilbert. 2009. Separating the Steric and Eustatic Contributions to Global Sea-Level Rise. Atmosphere-Ocean. In press

Galand, P., C. Lovejoy, A.K. Hamilton, R.G. Ingram, E. Pedneault and E.Carmack. 2009. Archaeal diversity and biogeochemical function are coupled to oceanic circulation. Environ Microbiol. In press.

Harrison, D.E., M. Johnson, C.W. Clark, D. Roemmich, H.J .Freeland, G. Goni, M. Merrifield, M. McPhaden, R. Weller, U. Send, D. Meldrum, G. Ball and M. Hood. 2009. The in situ Global Ocean Observing System - Progress since OceanObs1999. White paper, GODAE Workshop . In press.

Hay, M.B., R. Pienitz, S.E. Calvert, A. Dallimore, R.E. Thomson and T.R. Baumgartner. 2008. Geochemical, isotopic and diatom signatures of homogeneous mud units in sediment cores recovered from Effingham Inlet, British Columbia (Canada). Geology. In press.

Hiromichi, U., H.J. Freeland, W.R. Crawford, H. Onishi, E. Oka,and T. Suga. 2009. Anticyclonic eddies in the Alaskan Stream. Journal of Physical Oceanography. In press

Itoh, M., K. Shimada, T. Kamoshida, F. McLaughlin, E.C. Carmack, and S. Nishino. 2009. Interannual variability in Pacific winter water inflow through Barrow Canyon form 2000 to 2006. Journal of Geophysical Research. Accepted.

Ivanochko, T.S., S.E. Calvert, R.E. Thomson and T.Pedersen. 2009. Geochemical reconstruction of Pacific Decadal variability from the Eastern North Pacific during the Late Holocene. Can.J.Earth Sciences. In press. 

Lacorte, S. and Ikonomou, M.G. 2009. Occurrence and Congener Specific Profiles of PBDEs and their Hydroxylated and Methoxylated PBDEs in Breast Milk from Catalonia. Chemosphere. 74(3):412-420.

Ladd, C., W.R. Crawford, C.E. Harpold, W.K. Johnson, N.B. Kachel, P. Stabeno and F.A.Whitney. 2009. A synoptic survey of young mesoscale eddies in the Eastern Gulf of Alaska. Deep-Sea Research II. Accepted.

Lobkovskii, L.I., A.B. Rabinovich, E.A .Kulikov, A.I. Ivashchenko, I.V. Fine, R.E. Thomson, T.N. Ivel'skaya and G.S. Bogdanov. 2009. The Kuril Earthquakes and Tsunamis of November 15, 2006 and January 13, 2007: Observations, Analysis, and Numerical Modeling. Oceanology. In press. 

Macdonald, R.W., V. Forsland, R. Withler, D.A. Patterson and A.Demsky. 2009. The use of stable oxygen isotope composition in sockeye salmon body fluid to determine whether a fish has been caught in fresh water. North American Journal of Fisheries Management. In press

Mackas, D.L. and G. Beaugrand. 2009. Comparisons of zooplankton time series. Journal of Marine Systems. In press. 

Meloche M.L., deBruyn, A.M.H., Otton, V.S., Ikonomou, M.G. and Gobas, F.A.P.C. 2009. Assessing Exposure of Sediment Biota to Organic Contaminants by Thin-Film Solid Phase Extraction. Environ. Tox. Chem. In press. 

Muenchow, A. and H. Melling. 2009. Ocean flux observations from Nares Strait to the west of Greenland: Interannual to tidal variability and forcing. Journal of Marine Research. Under review. 

Nelson, R.J., E. Carmack, F. McLaughlin and G. Cooper. 2009. Population genetics of Calanus glacialis in the western Arctic Ocean: connection to the Pacific and Atlantic oceans. Marine Ecology Progress Series. Under review.

Overland, J.E., J. Alheit, A. Bakun, J. Hurrell, D. Mackas and A.J. Miller. 2009. Climate Controls on Marine Ecosystems and  fish populations. J.Marine Systems. In press.

Park, H., Ikonomou, M.G., Kim, H-S., Choi, J-W. and Chang, Y-S. 2009. Dioxin and Dioxin-Like PCB Profiles in the Serum of Industrial and Municipal Waste Incinerator Workers in Korea. Environ. Intern. In Press.

Proshutinsky, A., R. Krishfield, M.L. Timmermans, J. Toole, I. Ashik, V. Sokolov, I. Frolov, E. Carmack, F. McLaughlin, J.C. Gascard, M. Itoh, K. Shimada, I. Polyakov, J. Morrison, M. Steel, B. Rudels and U. Schauer. 2009. 2007 the Arctic Ocean climate report. Bull.Amer.Meteor.Soc. In press.

Rabinovich, A.B. 2009. Seiches and Harbour Oscillations. Handbook of Coast and Ocean Engineering. Accepted.

Roemmich, D., M. Belbeoch, P.J.V. Belchi, H.J. Freeland, W.J. Gould, F. Grant, M. Ignaszewski, B. King, K.A. Klein, W.B. Mork, W.B. Owens, S. Pouliquen, M. Ravichanddran, S. Riser, A. Sterl, T. Suga, M.-S. Suk, P. Sutton, V. Thierry, P.-Y. Letraon, S. Wijffels, and J. Xu. 2009. Argo- the challenge of continuing 10 years of progress. White paper, GODAE Workshop. In press

Ross, P.S., Couillard, C.M., Ikonomou, M.G., Johannessen, S.D., Lebeuf, M., Macdonald, R.W. and Tomy, G.T. 2009. Large and Growing Environmental Reservoirs of Deca-BDE present an Emerging Health Risk for Fish and Marine Mammals. Marine Pollution Bulletin. 58:7-10.

Schloss, I.R., C. Nozais, S. Mas, E. Carmack, B.Van Hardenberg, S. Brugel, J.-E. Tremblay, and S. Demers. 2009. Pico and nanoplankton in the southeastern Beaufort Sea (Mackenzie Shelf - Amundsen Gulf) during fall 2002. Journal of Marine Systems. In press.

Ueno, H., H.J. Freeland, W.R. Crawford, H. Onishi, E. Oka and T. Suga. 2009. Anticyclonic eddies in the Alaskan Stream. Journal of Physical Oceanography. Accepted.

Wong, C.S., L. Xie and W.W. Hsieh. 2009. Variation of nutrients and carbon caused by regime shift in subarctic Northeast Pacific. Journal of Geophysical Research. In press. 

Weise, A.M., C.J. Cromey, M.D. Callier, P. Archambault, J. Chamberlain and C.W.McKindsey. 2009. Shellfish-DEPOMOD: Modelling the biodeposition from suspended shellfish aquaculture and assessing benthic effects. Aquaculture. Accepted.

Yamamoto-Kawai, M. and E. Carmack. 2009. Surface freshening of the Canada Basin in 2000s: river runoff versus sea ice meltwater. Journal of Geophysical Research. Accepted.

Burd, B.J., P.A.G. Barnes, C. A. Wright and R.E. Thomson. 2008. Responses of subtidal benthos of the Strait of Georgia to ambient sediment conditions and natural and anthropogenic deposition. Marine Environmental Research. Special edition. Benthic processes, organic carbon cycling and contaminants in the Strait of Georgia, Canada. 66(1):S62-S79.

Burd, B., R.W. Macdonald, S.C. Johannessen and A.van Roodselaar. 2009. Axinopsida serricata shell encrustation: A potential indicator of organic enrichment conditions in sediments in the southern Strait of Georgia, British Columbia, Canada. Marine Environmental Research. Special edition. Benthic processes, organic carbon cycling and contaminants in the Strait of Georgia, Canada. 66(1):S101-S111.

Candella, R., A.B. Rabinovich and R.E. Thomson. 2008. The 2004 Sumatra tsunami as recorded on the Atlantic coast of South America. Advances in Geosciences. 14:117-128. 

Carmack, E.C. and Macdonald, R.W. 2008. Water and ice related phenomena in the coastal region of the Beaufort Sea: some parallels between native experience and western science. Arctic. 61(3):265-280.

Carmack, E., F. McLaughlin, M.Yamamoto-Kawai, M.Itoh, K.Shimada, R.Krishfield and A.Proshutinsky. 2008. Freshwater Storage in the Northern Ocean and the Special Role of the Beaufort Gyre. In: Dickson, R. R. et al (Eds.). Arctic-Subarctic Ocean Fluxes: Defining the Role of the Northern Seas in Climate. 7:145-169.

Carmack, E. 2008. The Arctic Ocean's Freshwater Budget: Sources, Storage and Export. In: Lewis, E. L. et al (eds.). The Freshwater Budget of the Arctic Ocean. 91-126

Carmack, E., F. McLaughlin, S. Vagle, and H. Melling. 2008. Canada's Three Oceans (C3O): A Canadian contribution to the International Polar Year. PICES Press. 16(2):22-25. doi:ISSN 1195-2512. 

Chapman, P.M., J. Cullen, C. Garrett, J. Littlepage, T. Pedersen, D.E. Varela, R.W. Macdonald, R.E. Thomson and T. Parsons. 2008. Sewage treatment wasted - The Victoria (BC, Canada) example. Marine Pollution Bulletin. 56:1815-1816. 

Cherniawsky, J.Y. and G.J. Sutherland. 2008. Large-scale errors in ERS altimeter data. Marine Geodesy. 31(1):2-16.(http://dx.doi.org/10.1080/01490410701812212).

Choi ,S.-D., S.-Y. Baek, Y.-S. Chang, F. Wania, M.G. Ikonomou, Y.-J. Yoon, H. Park and S.Hong. 2008. Passive air sampling of Polychlorinated Biphenyls and Organochlorine Pesticides at the Korean Arctic and Antarctic Research Stations: Implications for long-range transport and local pollution. Environmental Science and Technology. 42(19):7125-7131. 

Christian ,J.R., R.A. Feely, M. Ishii, R. Murtugudde and X.Wang. 2008. Testing an ocean carbon model with observed sea surface pCO2 and DIC in the tropical Pacific Ocean. Journal of Geophysical Research. doi:10.1029/2007JC004428. 

Conlan, K., A. Aitken, E. Hendrycks, C. McClelland and H. Melling. 2008. Canadian Beaufort shelf macrobenthos: A Wealth for top predators. Journal of Marine Systems. 74:864-886. doi:10.1016/j.jmarsys.2007.10.002. 

Cooke, S.J., S.G. Hinch, A.P. Farrell, D.A. Patterson, K. Miller-Saunder, D.W. Welch, M.R. Donaldson, K.C. Hanson, G.T. Crossin, M.T. Mathes, A.G. Lotto, K.A. Hruska, I.C. Olsson, G.N. Wagner, R.E. Thomson, R. Hourston, K.K. English, S. Larsson, J.M. Shrimpton, and G. Van Der Kraak. 2008. Developing a mechanistic understanding of fish migrations by linking telemetry with physiology, behaviour, genomes and experimental biology: an Interdisciplinary case study on adult Fraser River Sockeye Salmon. Fisheries. 33(7):321-338. 

Couillard, C.M., S.C. Courtenay and R.W. Macdonald. 2008. Interactions Affecting the Risk of Impacts on Aquatic Organisms: A Review with a Canadian Perspective - Interactions Affecting Vulnerability. Environ.Rev. 16:19-44. 

Couillard, C.M., R.W. Macdonald and S.C. Courtenay. 2008. Interactions between toxic chemicals and other environmental factors affecting the risk of impacts on aquatic organisms: A review with a Canadian perspective - Interactions affecting exposure. Environ.Rev. 16:1-17. 

Crawford, W.R. and W.T. Peterson. 2008. Recent trends in waters of the subarctic NE Pacific. PICES Press. 16(1):34-35. 

Crawford, W.R. 2008. Recent trends in waters of the subarctic NE Pacific. PICES Press. 16(2):32-33. 

Cullon, D., M. Yunker, C. Alleyne, N. Dangerfield, S. O'Neill, M. Whiticar and P.S. Ross. 2008. Persistent organic pollutants in chinook salmon:implications for resident killer whales of British Columbia and adjacent waters. Environmental Toxicology & Chemistry. 28(1). 

Denman, K.L. 2008. Climate Change, Ocean Processes, and Iron Fertilization. Marine Ecology Progress Series. 364:219-225.

Danon-Schaffer, M., J.R. Grace and M.G. Ikonomou. 2008. PBDEs in waste disposal sites from Northern Canada. Organohalogen Compounds. 70:365-368. 

DFO. 2008. State of physical, biological, and selected fishery resources of Pacific Canadian marine ecosystems. In: Irvine, J. and Crawford, W. R. (Eds.). 2008-013: doi: http://www.dfo-mpo.gc.ca/csas/Csas/Publications/ResDocs-DocRech/2008/2008_013_e.htm. 

DFO. 2008. State of the Pacific Ocean 2007. In: Crawford, W. R. and Irvine, J. (Eds.). 2008-028. doi:http://www.dfo-dfo-mpo.gc.ca/CSAS/Csas/Publications/SAR-AS/2008/2008_028_e.htm. 

Feely, R.A., C.L. Sabine, J.M. Hernandez-Ayon, D. Ianson and B. Hales. 2008. Evidence for upwelling of corrosive 'acidified' water onto the Continental Shelf. Science. 320:1490-1492.  doi:10.1126/science.155676. 

Fernandez, M.P., I.D. Buchanan and M.G. Ikonomou. 2008. Seasonal variability in the reduction in estrogenic endocrine disrupting chemicals at a Municipal WWTP. Water Research. 42(12):3075-3081. 

Fissel, D., J.R. Marko and H. Melling. 2008. Advances in upward looking sonar technology for studying the processes of change in Arctic Ocean ice climate. Journal of Operational Oceanography. 1(1):9-18. 

Foreman, M.G.G., W.R. Crawford, J.Y. Cherniawsky and J. Galbraith. 2008. Dynamic ocean topography for the northeast Pacific and its continental margins. Geophysical Research Letters. doi:10.1029/2008GL035152

Foreman, M.G.G., W.Callendar, A.MacFadyen, B.M. Hickey, R.E. Thomson and E.Di Lorenzo. 2008. Modeling the generation of the Juan de Fuca Eddy. Journal of Geophysical Research. 113(C03006). doi:10.1029/2006JC004082. 

Friesen, E.N., M.G. Ikonomou, D.A. Higgs, P.K. Ang and C. Dubetz. 2008. Use of terrestrial based lipids in aquaculture feeds and the effects on flesh organohalogen and fatty acid concentrations in farmed Atlantic salmon. Environmental Science and Technology. 42(10):3519-3523. 

Garrett, C. and P.F. Cummins. 2008. Limits to tidal current power. Renewable Energy. 33:2485-2490. 

Gemmrich, J.R., M.L. Banner and C.Garrett. 2008. Spectrally resolved energy dissipation and momentum flux of breaking waves. Journal of Physical Oceanography. 38:1296-1312. doi:10.1175/2007JPO3762.1. 

Gemmrich, J.R. 2008. Breaking waves and near-surface turbulence. In: Steele, J, Thorpe, S., and Turekian, K. K. [Eds.]. Encyclopedia of Ocean Sciences. 4000 pp 

Hare, A., R.W. Macdonald, Z.A. Kuzyk and F. Wang. 2008. Contemporary and Preindustrial Mass Balance Budgets of Mercury in the Hudson Bay Marine System: The Role of Lateral Sediment Recycling Transport. Science of the Total Environment. 406(1):190-204. doi:10.1016/j.scitotenv.2008.7.033. 

Harris, K.A., N. Dangerfield, M. Woudneh, T.G. Brown, S. Verrin and P.S. Ross. 2008. Partitioning of current-use and legacy pesticides in salmon habitat in British Columbia, Canada. Environmental Toxicology & Chemistry. 27(11):2253-2262. 

Holloway, G. 2008. Observing global ocean topostrophy. J. Geophys. Res. 113(C07054). doi:10.1029/2007JC004635,2008. 

Hood, R.R. and J.R. Christian. 2008. Ocean N-Cycle Modeling. In: Capone, Bronk, Mulholland, and Carpenter, [Eds]. 2nd Edition of 'Nitrogen in the Marine Environment'.  Elsevier.  

Ikonomou, M., S.-S. Cai, M.P. Fernandez, J.D. Blair and M. Fischer. 2008. Multi-residue analysis for EDCs in wastewater by GC-HRMS: characterization of EDCs in municipal and bleach kraft mill effluents. Environmental Toxicology & Chemistry. 27(2):243-251. 

Ikonomou, M.G. and R.F. Addison. 2008. Polybrominated diphenyl ether(PBDE) in Seal Populations from Eastern and Western Canada: An Assessment of the processes and factors controlling PBDE distribution in seals. Marine Environ.Research 66:225-230.

Johannessen, S.C., R.W. Macdonald and B.Burd. 2008. Biogeochemical cycling in the Strait of Georgia. Marine Environ.Research. Special Issue. Benthic processes, organic carbon cycling and contaminants in the Strait of Georgia, Canada. 66(1):S1-S2.

Johannessen S.C., G. Potentier, C.A.Wright, D. Masson, and R.W.Macdonald. 2009. Water column organic carbon in a Pacific Marginal sea (Strait of Georgia, Canada). Marine Environ.Research . Special Issue. Benthic processes, organic carbon cycling and contaminants in the Strait of Georgia, Canada. 66(1):S49-S61.

Johannessen, S.C., R.W. Macdonald, C.A. Wright, B. Burd, D.P.Shaw and A.van Roodselaar. 2009. Joined by geochemistry, divided by history: PCBs and PBDEs in Strait of Georgia sediments. Marine Environ.Research. Special Issue. Benthic processes, organic carbon cycling and contaminants in the Strait of Georgia, Canada. 66(1):S112-S120

Kang, S..K., Cherniawsky, J.Y., M.G.G. Foreman, J.-K. So and S.R. Lee. 2008. Spatial variability in annual sea level variations around the Korean peninsula. Geophys. Res. Lett. 35:L03603. doi:10.1029/2007GL032527.

Kelly, B.C., M. Ikonomou, J.D. Blair and F.A.P.C.Gobas. 2008. Bioaccumulation Behaviour of Polybrominated Diphenyl Ethers in a Canadian Arctic Marine Food Web. Science of the Total Environment. 401(1-3):60-72. 

Kelly, B.C., M.G. Ikonomou, D.A. Higgs, J. Oakes and C .Dubetz. 2008. Mercury and other trace elements in farmed and wild salmon from British Columbia, Canada. Environmental Toxicology & Chemistry. 27(6):1361-1370. 

Kelly, B.C., M.G. Ikonomou, J.D. Blair and F.A.P.C. Gobas. 2008. Behaviour of Hydroxylated and Methoxylated polybrominated diphenyl ethers in an Arctic Marine Food Web. Environmental Science and Technology. 42(19):7069-7077. 

Kuzyk, Z.A., M.A. Goni, G.A. Stern and R.W. Macdonald. 2008. Sources, pathways and sinks of particulate organic matter in Hudson Bay: evidence from lignin distributions. Marine Chemistry. doi:10.1016/j.marchem.2008.08.001. 

Kuzyk, Z.A., R.W. Macdonald, M.A. Granskog, R.K. Scharien, R.J. Galley, C. Michel, D.G. Barber and G.A. Stern. 2008. Sea ice, hydrological, and biological processes in the Churchill River estuary region, Hudson Bay. Estuarine, Coastal and Shelf Science 77:369-384.  doi:10.1016/j.ecss.2007.09.030. 

Laval, B.E., J. Morrison, D.J. Potts, E. Carmack, S. Vagle, C. James, F. McLaughlin and M. Foreman. 2008. Wind-driven summertime upwelling in a fjord-type and its impact on downstream river conditions; Quesnel Lake and River, British Columbia. Journal of Great Lakes Research. 34:189-203. 

Lavoie, D., K.L. Denman and R.W. Macdonald. 2008. Primary productivity and export fluxes on the Canadian shelf of the Beaufort Sea: a modelling study. Ocean Modelling. doi:10.1016/j.jmarsys.2008.07.007. 

Macdonald, R.W. 2008. Are contaminants in the Arctic Ocean yesterday's problem? Meridian. Spring/Summer 2008. 

Macdonald, R.W., F. Wang, G.A. Stern and P.M. Outridge. 2008. The overlooked role of the ocean in mercury cycling in the arctic. Marine Pollution Bulletin. 56:1963-1965. 

Macdonald, R.W., F. Wang, G.A. Stern and P.M. Outridge. 2008. Mercury in the Arctic: Are we overlooking the ocean? Integrated Environmental Assessment and Management. 5(1):6-8. 

Macdonald, R.W. 2008. Consequences of warming in the Arctic with reference to northern security. In: Harris, J. and Simons, J. [Eds]. Arctic Security in the 21st Century. School for International Studies, Simon Fraser University, Vancouver. 20-26.

Macdonald, R.W., S.C. Johannessen, C. Gobeil, C.A. Wright, B. Burd and A. van Roodselaar. 2008. Sediment redox tracers in Strait of Georgia sediments-can they inform us of the loadings of organic carbon from municipal wastewater? Marine Environ.Research. Strait of Georgia Cycling special issue. 66(1):S87-S100.  doi:10.1016/j.marenvres.2008.08.001. 

Macdonald, R.W., L.G. Anderson, J.P. Christensen, L.A. Miller, I.P. Semiletov and R. Stein. 2008. The Arctic Ocean: budgets and fluxes. In: Liu, K. K., Atkinson, L., Quinones, R., and Talaue-McManus, L. [Eds.]. Carbon and nutrient fluxes in continental margins: A global synthesis.  IGBP Series. 

Maltrud, M. and G. Holloway. 2008. Implementing biharmonic neptune in a global eddying ocean model. Ocean Modelling. 21:22-34. doi:10.1016/j.ocemod.2007.11.003.

Mazzotti, S. and R.E. Thomson. 2008. Relative and Absolute Sea-Level Rise in Western Canada and North-western U.S. from a Combined Tide Gauge-GPS Analysis. Journal of Geophysical Research - Oceans. 113(C11019). doi:10.1029/2008JC004835. 

McLaughlin, F., M. Yunker, F.A. Whitney, K .Lee, B. Fowler, M. Fowler and R. Robinson. 2008. Hydrocarbon and Hydrographic Data from Southern Hecate Strait: Water and Sediment Samples Collected in September, 2003. Canadian Technical Report of Hydrography and Ocean Sciences.168. 

McLaughlin, F., E. Carmack, S .Zimmermann, D. Sieberg, L. White, J. Barwell-Clarke, M. Steel and W.K.W.Li. 2008. Physical and Chemical Data from the Canada Basin, August 2004. Canadian Technical Report of Hydrography and Ocean Sciences. 140. 

Melling, H., T.A. Agnew, K.K. Falkner, D.A. Greenberg, C.M. Lee, A. Münchow, B. Petrie, S.J. Prinsenberg, R.M. Samelson and R.A.Woodgate. 2008.  Fresh-water fluxes via Pacific and Arctic outflows across the Canadian polar shelf. In: R.R. Dickson, J. Meincke and P. Rhines. [Eds.].  Arctic Sub-Arctic Ocean Fluxes: Defining the role of the Northern Seas in climate. 193-248. Springer. Netherlands.

Melling, H. 2008. The Thickness of Arctic Pack Ice - Advances and Challenges. In: P. Lemke [Ed.]. Chapter 3: ARCTIC Climate Change - The ACSYS Decade and Beyond. Springer Verlag. 

Michelutti, N., B.E. Keatley, S. Brimble, J.M. Blais, H. Liu, S.V. Douglas, M.L. Mallory, R.W. Macdonald and J.P. Smol. 2008. Seabird-driven shifts in Arctic pond ecosystems. Proc.R.Soc.B. doi: 0.1098/rspb.2008.1103. 

Morris, J.F.T., M. Trudel, M. Thiess, T.B. Zubkowski, C.A. Boyle and H.R.MacLean. 2008. CCGS W.E. Ricker Gulf of Alaska Salmon Survey, June 21-30, 2006. Canadian Data Report of Fisheries and Aquatic Sciences. 1198. 

Morris, J.F.T., M. Trudel, M. Thiess, C.A. Boyle, T.B. Zubkowski and H.R. MacLean. 2008. CCGS W.E.Ricker Gulf of Alaska Salmon Survey, November 7 - December 5, 2006. Canadian Data Report of Fisheries and Aquatic Sciences. 1199. 

Morris, J.F.T., M. Trudel, M. Thiess, C.A. Boyle, T.B. Zubkowski and H.R. MacLean. 2008. CCGS W.E. Ricker Gulf of Alaska Salmon Survey, February 28-March 23, 2007. Canadian Data Report of Fisheries and Aquatic Sciences. 1206. 

Mucci, A., A. Forest, L. Fortier, M. Fukuchi, J. Grant, H. Hattori, P. Hill, G. Lintern, R. Makabe, C. Magen, L. Miller, M. Sampei, H. Sasaki, B. Sundby, T. Walker and P. Wassmann. 2008. Organic and inorganic fluxes. In: Fortier, L., Barmber, D., and Michaud, J. [Eds.]. On Thin Ice: A synthesis of the Canadian Arctic Shelf Exchange Study (CASES). 7.

Nemcek, N., D. Ianson and P.D. Tortell. 2008. A high-resolution survey of DMS, CO2 and O2/Ar distributions in productive coastal waters. Global Biogeochemical Cycles. 22. doi:10.1029/206GN002879. 

Otton, V., M.G. Ikonomou and F.A.P.C. Gobas. 2008. Biodegradation of Mono-Alkyl Phthalate Esters in Natural Sediments. Chemosphere. 71:2011-2016. 

Outridge, P.M., R.W. Macdonald, F. Wang, G.A. Stern and A.P. Dastoor. 2008. A Mass Balance Model of Mercury in the Arctic Ocean. Environmental Chemistry. 5:89-111.  doi:10.1071/EN08002.

Rabinovich, A.B., R.E. Thomson, V.V. Titov, F.E. Stephenson and G.C. Rogers. 2008. Locally Generated Tsunamis Recorded on the Coast of British Columbia. Atmosphere-Ocean. 46(3):343-360. doi:10.3137/ao.460304. 

Rabinovich, A.B., L.I. Lobkovsky, I.V. Fine, R.E. Thomson, T.N. Ivelskaya and E.A. Kulikov. 2008. Near source observations and modeling of the Kuril Islands Tsunamis of 15 November 2006 and 13 January 2007. Advances in Geosciences.14:105-116.

Rogachev, K., E. Carmack and M. Foreman. 2008. Bowhead whales feed on plankton concentrated by estuarine and tidal currents in Academy Bay, Sea of Okhotsk. Continental Shelf Research. 28:1811-1826.  doi:10.1016/j.csr.2008.04.014. 

Ross, P.S., C.M. Couillard, M. Ikonomou, S.C. Johannessen, M. Lebeuf, R.W. Macdonald and G.T.Tomy. 2008. Polybrominated diphenylethers (PBDEs) in the Canadian marine environment: An emerging health risk for fish, marine mammals and their habitat. Canadian Science Advisory Secretariat Research Document. 2008/036. 

Ross, P.S. and P.Grant. 2008. Persistent Organic Pollutants. In: Melnick, E. and Evveritt, B. [Eds.]. Encyclopedia of Risk Assessment. Chichester, John Wiley & Sons Ltd. 2008

Ross, P.S., C.M. Couillard, M. Ikonomou, S.C. Johannessen, M. Lebeuf, R.W. Macdonald and G.T. Tomy. 2008. Large and growing environmental reservoirs of deca-BDE present an emerging health risk for fish and marine mammals. Marine Pollution Bulletin. 58(1):7-10. doi: 10.1016/j.marpolbuul.2008.09.002. 

Rudels, B., L. Anderson, G. Bjork, E. Fahrbach, E.P. Jones, H. Melling, S. Prinsenberg and U. Schauer. 2008. ACSYS Achievements-Ocean. In: P. Lemke [Ed.]. Chapter 2: Arctic climate change - the ACSYS decade and beyond. Springer Verlag.

Shelver, W.L., C.D. Parotta, R. Slawecki, Q.X. Li, M.G. Ikonomou, D. Barcelo, S. Lacorte and F.M.Rubio. 2008. Development of a magnetic particle immunoassay for polybrominated diphenyl ethers and application to environmental and food matrices. Chemosphere. 73(1):S18-S23. 

Steiner, N. and K.L. Denman. 2008. Parameter sensitivities in a 1-D model for DMS and sulphur cycling in the upper ocean. Deep-Sea Research I. 55:847-865.  doi:10.1016/j.dsr.2008.02.010. 

Subbotina, M.M., R.E. Thomson and M.V.Anisimov. 2008. Numerical simulation of a hydrophysical structure near the seafloor in a hydrothermal venting region. Translated from Doklady Akademii Nauk. 423( 3–6). Oceanology. 423A(9):1423-1426. 

Thomson, R.E., B.D. Bornhold and S. Mazzotti. 2008. An Examination of the factors affecting relative and absolute sea level in coastal British Columbia. Can. Tech.Rep. Hydrogr.Ocean Sci. 260:v + 49p

Thomson, R.E. and I.V. Fine. 2008. A diagnostic model for mixed layer depth estimation with application to Ocean Station "P" in the northeast Pacific. Journal of Physical Oceanography. Doi: 10.1175/2008JPO3984.1. 

Tierney, K.B., J.L. Samson, P.S. Ross, M.A. Sekela and C.J. Kennedy. 2008. Salmon olfaction is impaired by an environmentally realistic pesticide mixture. Environmental Science & Technology. 42(13):4996-5001. doi:10.1021/es800240u. 

Tremblay, J.-É., K. Simpson, J. Martin, L. Miller, Y. Gratton, D. Barber and N. M. Price. 2008. Vertical stability and the annual dynamics of nutrients and chlorophyll fluorescence in the coastal, southeast Beaufort Sea, J. Geophys. Res., 113(C07S90). doi:10.1029/2007JC004547.

Trevorrow, M.V., B. Vasiliev and S. Vagle. 2008. Directionality and maneuvring effects on a surface ship underwater acoustic signature. J.Acoust.Soc.Am. 124(2):767-778.  doi:10.1121/1.2939128. 

Williams, W.J., H. Melling, E.C. Carmack and R.G. Ingram. 2008. Kugmallit Valley as a conduit for cross-shelf exchange on the Mackenzie Shelf in the Beaufort Sea. Journal of Geophysical Research. 113. doi:1029/2006JC003591. 

Yamamoto-Kawai, M., F. A. McLaughlin, E. C. Carmack, S. Nishino and K. Shimada. 2008. Freshwater budget of the Canada Basin, Arctic Ocean, from salinity, δ¹⁸O, and nutrients. J. Geophys. Res. 113:C01007. doi:10.1029/2006JC003858.

Yamazaki, H., H. Burchard, K.L. Denman and T.Nagai. 2008. One-dimensional mixed layer models. Encyclopedia of Ocean Sciences, Second Edition. Available online, August, 2008.

Zahariev, K., J.R. Christian and K.L. Denman. 2008. Preindustrial, historical, and fertilization simulations using a global ocean carbon model with new parameterizations of iron limitation, calcification, and N2 fixation. Progress in Oceanography. 77:56-82.  doi:10.1016/j.pocean.2008.01.007. 

Assunção, M.G.L., K.A. Miller, N. Dangerfield, S.M. Bandiera and P.S. Ross. 2007. Cytochrome P4501A expression and organochlorine contaminants in harbour seals (Phoca vitulina): evaluating a biopsy approach. Comparative Biochemistry and Physiology. 145:256-264.

Batten, S.D. and H.J. Freeland. 2007. Plankton populations at the bifurcation of the North Pacific Current. Fisheries Oceanography. 16(6):536-546. 

Bidleman, T.F., H. Kylin, L.M. Jantunen, P.A. Helm and R.W. Macdonald. 2007. Hexachlorocycloheexanes in the Canadian Archipelago. 1. Spatial Distribution and Pathways of HCHs in Surface Water. Environmental Science & Technology. 41(8):2688-2695.

Blais, J.M., R.W. Macdonald, D. Mackay, E. Webster, C. Harvey and J.P. Smol. 2007. Biologically mediated transport of contaminants to aquatic systems. Environmental Science & Technology. 41(4):1075-1084. doi:10.1021/es061314a. 

Bornhold, B.D., J.R. Harper, D. McLaren and R.E. Thomson. 2007. Destruction of the First Nations village of Kwalate by a rockfall-generated tsunami. Atmosphere-Ocean. 45(2):123-128. doi:10.3137/ao.450205. 

Carmack, E. 2007. The alpha/beta ocean distinction: a perspective on freshwater fluxes, ventilation, nutrients and primary productivity in high-latitude seas. Deep-Sea Research II. 54(23-26):2578-2598 doi:10.1016/j.dsr2.2007.08.018. 

Chamberlain, J. and D. Stucchi. 2007. Simulating the effects of parameter uncertainty on waste model predictions of marine finfish aquaculture. Aquaculture. 272(1-4):296-311. 

Cherniawsky, J.Y., V. Titov, K. Wang and J.-Y.Li. 2007. Numerical simulations of tsunami waves and currents for southern Vancouver Island from a Cascadia megathrust earthquake. Pure and Applied Geophysics.164:465-492. doi:10.1007/s00024-006-0169-0. 

Christensen, J., M. Macduffee, M. Yunker and P.S.Ross. 2007. Hibernation-Associated Changes in persistent Organic Pollutant (POP) Levels and Patterns in British Columbia Grizzly Bears (Ursus arctos horribilis). Environmental Science & Technology. 41(6):1834-1840.

Christian, J.R. 2007. Advection in plankton models with variable elemental ratios. Ocean Dynamics. 57:63-71.

Christian, J.R. 2007. Guide to best practices for ocean C02 measurements. In: PICES Special Publication 3, Dickson A. G., Sabine, C. L., and Christian, J. R. [Eds.]. 191pp. 

Conway, K. and D.I. Johannessen. 2007. Appendix A: Geology. In: Lucas B.G., Verrin, S. and Brown, R. [Eds.]. Ecosystem overview: Pacific North Coast Integrated Management Area (PNCIMA),  Can. Tech Rep. Fish. Aquat. Sci. 2667.

Crawford, W.R. 2007. Recent trends in waters of the subarctic northeast Pacific. PICES Press. 14(2):24-25. 

Crawford, W.R. and B. Greenan. 2007. Physical Oceanography in Canada, 2003-2007, 2007: A review for the International Union of Geodesy and Geophysics. Available at http://www.cmos.ca/scor/IAPSOreport2003_2007.pdf

Crawford, W.R. and I.R. Perry. 2007. DFO Ocean Status Report 2007/001 State of the Pacific Ocean 2006. 

Crawford, W.R. and P. Chandler. 2007. Recent trends in waters of the subarctic NE Pacific, Cooler and fresher in summer of 2006. PICES Press. 15(1):22-23. 

Crawford, W.R. and P.F. Cummins. 2007. Recent trends in waters of the subarctic NE pacific: Cooling of 2006 continued into 2007. PICES Press. 15(2):26-27. 

Crawford, W.R., D.I. Johannessen, F.A.Whitney, R. Birch, K. Borg, D. Fissell and S. Vagle. 2007. Appendix C: Physical and Chemical Oceanography. In: Lucas B.,  G., Verrin, S. and Brown, R. [Eds]. Ecosystem overview: Pacific North Coast Integrated Management Area (PNCIMA). Can. Tech. Rep. Fish. Aquat. Sci. 2667.

Crawford, W.R., F.A.Whitney, D.I. Johannessen, R. Birch, K. Borg, and D. Fissell. 2007. Appendix B: Meteorology and Climate. In: Lucas B., G., Verrin, S., and Brown, R. [Eds]. Ecosystem overview: Pacific North Coast Integrated Management Area (PNCIMA). Can. Tech. Rep. Fish. Aquat. Sci. 2667. 

Crawford, W.R., J. Galbraith and N. Bolingbroke. 2007. Line P ocean temperature and salinity, 1956-2005. Progress in Oceanography. 75:161-178. doi:10.1016/j.pocean.2007.08.017. 

Crawford, W.R., P.J. Brickley and A.C. Thomas. 2007. Mesoscale eddies determine phytoplankton distribution in northern Gulf of Alaska. Progress in Oceanography. 75:287-303. doi:10.1016/j.pocean.2007.08.016. 

Cummins, P.F. and H.J. Freeland. 2007. Variability of the N. Pacific Current and its bifurcation. Progress in Oceanography. 75:253-265. 

Denman, K.L., G. Brasseur, A. Chidthaisong, P. Ciais, P.M. Cox, R.E. Dickinson, D. Hauglustaine, C. Heinze, E. Holland, D. Jacob, U. Lohmann, S. Ramachandran, P.L. da Silva Dias, S.C. Wofsy and X. Zhang. 2007. Couplings Between Changes in the Climate System and Biogeochemistry. In: Solomon, S., D. Qin, M. Manning, Z. Chen, M. Marquis, K.B. Averyt, M.Tignor and H.L. Miller [Eds.]. Climate Change 2007: The Physical Science Basis. Contribution of Working Group I to the Fourth Assessment, Report of the Intergovernmental Panel on Climate Change. Cambridge University Press, Cambridge, United Kingdom and New York, NY, USA. IPCC WG1 Fourth Assessment Report. 

Dickson A. G., Sabine, C. L. and Christian, J. R. [Eds]. 2007.Guide to best practices for ocean C02 measurements. In: PICES Special Publication. 3. 191pp 

Drenzek, N.J., D.B. Montluçon, M.B. Yunker, R.W. Macdonald and T.I. Eglinton. 2007. Constraints on the origin of sedimentary organic carbon in the Beaufort Sea from coupled molecular 13C and 14C measurements. Marine Chemistry. 103:146-162. doi:10.1026/j.marchem.2006.06.017. 

Dumas, J.A., H. Melling and G.M. Flato. 2007. Late-summer pack ice in the Canadian Archipelago: Thickness observations from a ship in transit. Atmosphere-Ocean. 45(1):57-70.

Fernandez, M.P., M. Ikonomou and I. Buchanan. 2007. An assessment of environmental estrogens in Canadian wastewater. Science of the Total Environment. 373(1):250-269.

Fernandez, M.P., P.M. Campbell, M.G. Ikonomou, S.C. Courtenay, R.H. Devlin, D.L. MacLatchy and S. Royston. 2007. Assessment of the environmental estrogens and the intersex/sex reversal capacity for Chinook salmon (Oncorhynch ustshawytscha) in primary and final municipal wastewater effluents. Environ.Intern. 33(3):391-396.

Foreman, M.G.G , P.F. Cummins, J.Y. Cherniawsky and P. Stabeno. 2007. Tidal energy in the Bering Sea. Journal of Marine Research. 64:797-818. 

Freeland, H.J. 2007. A Short History of Ocean Station Papa and Line-P. Progress in Oceanography. 75:120-125.

Friedrichs, M.A.M., J.A. Dusenberry, L.A. Anderson, R. Armstrong, F. Chai, J.R. Christian, S.C.D oney, J. Dunne, M. Fujii, R.R. Hood, D. McGillicuddy, J.K. Moore, M. Schartau, Y. Spitz and J. Wiggert. 2007. Assessment of skill and portability in regional marine biogeochemical models: the role of multiple planktonic groups. Journal of Geophysical Research. 112. doi:10.1029/2006JC003852. 

Furgal, C., T.D. Prowse, B. Bonsai, R. Chouinard, C. Dickson, T. Edwards, D.I. Eerkes-Medrano, F. Jackson, H. Melling, D. Milburn, S. Nickels, M. Nuttall, A. Ogden, D. Peters, J. Reist, S. Smith and M.Westlake. 2007. Northern Canada. Chapter 3: From Impacts to Adaptation: Canada in a Changing Climate 2007. Natural Resources Council..

Garrett, C. and P.F. Cummins. 2007. Efficiency of a turbine in a tidal channel. J.Fluid Mech. 588:243-251. 

Gemmrich, J.R. 2007. Momentum flux and energy dissipation associated with breaking waves. In: Garbe, C. S., Handler, R. A., and Jaehne, B. [Eds.]. Transport at the air sea interface - measurements, models and parameterizations. Springer.

Gower, J. 2007. The 26 December 2004 tsunami measured by satellite altimetry. International Journal of Remote Sensing. 28(13-14):2897-2913.

Gower, J. and S. King. 2007. An Antarctic ice-related "superbloom" observed with the MERIS satellite imager. Geophysical Research Letters. 34(L15501). doi:10.1029/2007GL029638. 

Gower, J. and S. King. 2007. Validation of chlorophyll fluorescence derived from MERIS on the west coast of Canada. International Journal of Remote Sensing. 28(3-4):625-635. doi:10.1080/01431160600821010. 

Granskog, M.A., R.W. Macdonald, C.-J. Mundy and D.G. Barber. 2007. Distribution, characteristics and potential impacts of chromophoric dissolved organic matter (CDOM) in Hudson Strait and Hudson Bay, Canada. Continental Shelf Research. 27:2032-2050.

Gregory-Eaves, I., M.J. Demers, L.E. Kimpe, E.M. Krummel, R.W. Macdonald, B. Finney and J.M. Blais. 2007. Tracing Salmon-derived nutrients and contaminants in freshwater food webs across a pronounced spawner density gradient. Environmental Toxicology & Chemistry. 26(6):1100-1108. doi:0730-7268/07. 

Guo, L., C. Ping and R.W. Macdonald. 2007. Mobilization pathways of organic carbon from permafrost to arctic rivers in a changing climate. Geophysical Research Letters. 34. doi:1029/2007GL030689. 

Hare, R. 2007. Uncertainty management in Hydrographic Surveys. Lighthouse, Journal of the Canadian Hydrographic Association. 70:7-14. 

Harwood, L.A., T.G. Smith and H. Melling. 2007. Assessing the potential effects of near-shore hydrocarbon exploration on ringed and bearded seals in the Beaufort Sea region. Final Report ESRF 06-079.

Hickie, B., P.S. Ross, R.W. Macdonald and J.K.B. Ford. 2007. Killer Whales (Orcinus orca) Face protracted Health Risks Associated with Lifetime Exposure to PCBs. Environmental Science & Technology. 41(18):6613-6619. doi:10.1021/es0702519. 

Holloway,G., F.Dupont, E.Golobeva, S.Hakkinen, E.Hunke, M.Jin, M.Karcher, F.Kauker, M.Maltrud, M.A.Morales Maqueda, W.Maslowski, G.Platov, D.Stark, M.Steele, T.Suzuki, J.Y.Wang, D.Worthen and J.Zhang. 2007. Water properties and circulation in Arctic Ocean models. Journal of Geophysical Research. C04S06. doi:10.1029/2006JC003643. 

Holloway, G. and A. Proshutinsky. 2007. The role of tides in Arctic ocean/ ice climate. Journal of Geophysical Research. 112(C04S06). doi:10.1029/2006JC003643. 

Ikonomou, M.G., D.A. Higgs, M. Gibbs, J. Oakes, B. Skura, S. McKinley, S.K. Balfry, S. Jones, R. Withler and C. Dubetz. 2007. Flesh quality of market-size farmed and wild British Columbia salmon. Environmental Science & Technology. 41(2):437-443.

Itoh, M., E. Carmack, K. Shimada, F. McLaughlin, S. Nishino and S. Zimmermann. 2007. Formation and spreading of Eurasian source oxygen-rich halocline water to the Canadian Basin of the Arctic Ocean. Geophysical Research Letters. 34(L08603). doi:10.1029/2007Gl029482.

Jackson, J.M., P.G. Myers and D. Ianson. 2007. An examination of mixed layer sensitivity in the northeast Pacific Ocean from July 2001- July 2005 using the General Ocean Turbulence Model and Argo data. Deep-Sea Research I . In revision.

Johannessen, D.I., J.S. Macdonald, K. Harris and P.S. Ross. 2007. Marine environmental quality in the Pacific North Coast Integrated Management Area, British Columbia, Canada: A summary of contaminant sources, types and risks. 2716-51. 

Kelly, B.C., M. Ikonomou, J.D. Blair, A.E. Morin and F.A.P.C. Gobas. 2007. Food Web-Specific Biomagnification of Persistent Organic Pollutants. Science. 317:236-239. 

Kelly, B.C., S.L. Gray, M.G. Ikonomou, S.J. Macdonald, S.M. Bandiera and E.G. Hrycay. 2007. Lipid Reserve Dynamics and Magnification of persistent Organic Pollutants in Spawning Sockeye Salmon (Oncorhynchus nerka) from the Fraser River, British Columbia. Environmental Science & Technology. 41:3083-3089.

Lee, S.-J., M.G. Ikonomou, H. Park, S.-Y. Baek and Y.-S. Chang. 2007. Polybrominated diphenyl ethers in blood from Korean incinerator workers and general population. Chemosphere. 67(3):489-497. 

Lipsen, M.S., D.W. Crawford, J. Gower and P.J. Harrison. 2007. Spatial and temporal variability in coccolithophore abundance and production of PIC and POC in the NE subarctic Pacific during El Nino (1998), La Nina (1999) and 2000. Progress in Oceanography. 75(2007):304-325.

Lucas, B.G., S. Lindstrom and D.I. Johannessen. 2007. Appendix E: Marine Plants. In: Lucas B. G., Verrin, S. and Brown, R. [Eds.]. Ecosystem overview: Pacific North Coast Integrated Management Area (PNCIMA),  Can. Tech. Rep. Fish. Aquat.Sci. 2667.

Macdonald, R.W. 2007. Carbon cycling and contaminant fate in the Hudson Bay marine system 2007. In: Smith, S. and Stow, J. P. [Eds.]. Synopsis of Research Conducted under the 2006-2007 Northern Contaminants Research Program. 163-174.

Macdonald, R.W. 2007. Review of The Oceans and Marine Geochemistry, 2003. In: Elderfield, H., Holland, H. D, and Turekian, K. K [Eds]. Treatise on Geochemistry. (7):379-380.

Macdonald, R.W. 2007. Contaminants, global change and cold regimes. In: J.B. Orbaek, R. Kallenborn, I. Tombre, E. Hegseth, A. Falk-Petersen, A.H. Hoel  [Eds.]. Arctic-alpine ecosystems and people in a changing environment. Berlin, Spinger-Verlag. 

MacFarlane T., L., T. Hooper, K. Truman and D.I. Johannessen. 2007. Appendix K: Marine Birds. In: Lucas B. G., Verrin, S. and Brown, R. [Eds.]. Ecosystem overview: Pacific North Coast Integrated Management Area (PNCIMA),  Can. Tech. Rep. Fish.  Aquat.Sci. 2667.

Mackas, D., A. Pena, D.I. Johannessen, R. Birch, K. Borg and D. Fissel. 2007. Appendix D: Plankton. In: Lucas B. G., Verrin, S. and Brown, R. [Eds.]. Ecosystem overview: Pacific North Coast Integrated Management Area (PNCIMA),  Can. Tech. Rep. Fish.  Aquat.Sci. 2667.

Mackas, D., S.D. Batten and M. Trudel. 2007. Effects on zooplankton of a warming ocean: recent evidence from the Northeast Pacific. Progress in Oceanography. 75:223-252. doi:10.1016/j.pocean.2007.08.010. 

Masson, D. and P.F. Cummins. 2007. Temperature trends and interannual variability in the Strait of Georgia, British Columbia. Continental Shelf Research. 27(5):634-649. doi:10.1016/j.csr.2006.10.009. 

McKinnell, S.M. and W.R. Crawford. 2007. The 18.6-year lunar nodal cycle and surface temperature variability in the northeast Pacific. Journal of Geophysical Research. 112(C02002). doi:10.1029/2006JC003671. 

Miller, L.A. and G.R.DeTullio. 2007. Gas fluxes and dynamics in polynyas. In: Smith, W. O. Jr. and Barber, D. G. [Eds]. Polynyas: Windows to the World. Elsevier. 474 p.

Morris, J.F.T., M. Trudel, D.W. Welch, M. Thiess, T.B. Zubkowski and H.R. MacLean. 2007. CCGS W.E. Ricker Gulf of Alaska Salmon Survey, February 13-28, 2004. 1193. 49p. 

Morris, J.F.T., M. Trudel, M. Thiess, T.B. Zubkowski and H.R. MacLean. 2007. CCGS W.E. Richer Gulf of Alaska salmon survey, March 4-25, 2005. 1185. 

Morris, J.F.T., M. Trudel, M. Thiess, T.B. Zubkowski and H.R. MacLean. 2007. CCGS W.E. Ricker Gulf of Alaska Salmon Survey, June 12-19, 2004. 1194. 150p. 

Morris, J.F.T., M. Trudel, M. Thiess, T.B. Zubkowski and H.R. MacLean. 2007. CCGS W.E. Ricker Gulf of Alaska salmon survey, October 20 - November 21, 2004. 1184. 

Morris, J.F.T., M. Trudel, M. Thiess, T.B. Zubkowski and H.R. MacLean. 2007. CFV Frosti Gulf of Alaska Salmon Survey, June 28 - July 7, 2005. 1187. i-125. 

Morris, J.F.T., M. Trudel, M. Thiess, T.B. Zubkowski, C.A. Boyle and H.R. MacLean. 2007. CCGS W.E. Ricker Gulf of Alaska salmon survey, February 28 - March 27, 2006. 1191. i-73. 

Morris, J.F.T., M.T rudel, M. Thiess, T.B. Zubkowski, C.A. Boyle and H.R. MacLean. 2007. CFV Frosti Gulf of Alaska salmon survey, October 27 - November 20, 2005. 1186.

Morris,J.F.T., M.Trudel, M.Thiess, R.M.Sweeting, J.Fisher, S.A.Hinton, E.A.Fergusson, J.A.Orsi, E.V.Farley, Jr. and D.W.Welch. 2007. Stock-Specific Migrations of Juvenile Coho Salmon Derived from Coded-Wire Tag Recoveries on the Continental Shelf of Western North America. American Fisheries Society. 57:81-104. 

Mos, L., B. Morsey, S.J. Jefferies, M. Yunker, S. Raverty, S. De Guise and P.S. Ross. 2007. Chemical and biological pollution contribute to the immunological profiles of free-ranging harbor seals. Environmental Toxicology & Chemistry. 25(12):3110-3117.

Mos, L., M. Tabuchi, N. Dangerfield, S.J. Jeffries, B.F. Koop and P.S. Ross. 2007. Contaminant-associated disruption of vitamin A and its receptor (RARa) in free-ranging harbour seals (Phoca vitulina). Aquatic Toxicology. 81:319-328.

Münchow, A., K.K. Falkner and H. Melling. 2007. Spatial continuity of measured seawater and tracer fluxes through Nares Strait, a dynamically wide channel within the Canadian Archipelago. Journal of Marine Research. Journal of Marine Research. 65:000–000.

Nelson, J., F. Bishay, A. van Roodselaar, M.G. Ikonomou and F.C.P. Law. 2007. The use of in-vitro bioassays to quantify endocrine disrupting chemicals in municipal wastewater treatment plant effluents. Science of the Total Environment. 374:80-90.

Nishioka, J., T. Ono, H. Saito, T. Nakatsuka, S. Takeda, T. Yoshimura, K. Suzuki, K. Kuma, S. Nakabayashi, D. Tsumune, H. Mitsudera, W.K. Johnson and A. Tsuda. 2007. Iron supply to the western subarctic Pacific. Importance of Iron export from the Sea of Okhotsk. Journal of Geophysical Research. 112(C10012). doi:10.1029/2006JC004055. 

Norris,D.R., P.Arcese, D.Preikshot, D.F.Bertram, and T.K.Kyser. 2007. Diet reconstruction and historic population dynamics in a threatened seabird. J.Applied Ecology. doi:10.111/j.1365-2664.2007.01329.x. 

Pellegrin, N., J. Boutillier, R. Lauzier, S. Verrin and D.I. Johannessen. 2007. Appendix F: Invertebrates. In: Lucas B. G., Verrin, S. and Brown, R. [Eds.]. Ecosystem overview: Pacific North Coast Integrated Management Area (PNCIMA).  Can. Tech. Rep. Fish. Aquat.Sci. 2667.

Pena, A. and D.E. Varela. 2007. Seasonal and interannual variability in phytoplankton and nutrient dynamics along Line P in the NE subarctic Pacific. Progress in Oceanography. 75(2007):200-222. doi:10.1016/j.pocean.2007.08.009. 

Pena, A. and S.J. Bograd. 2007. Time series of the northeast Pacific. Progress in Oceanography 75(2007):115-119. doi:10.1016/j.pocean.2007.308.008. 

Rabinovich,A.B. 2007. Book review of "Changing Sea Levels: Effects of Tides, Weather and Climate". Bull.Amer.Meteor.Soc. 87:1588-1590. 

Rabinovich, A.B. and R.E. Thomson. 2007. The 26 December 2004 Sumatra tsunami: analysis of tide gquge data from the World Ocean. Part 1. Indian Ocean and South Africa. Pure and Applied Geophysics. 164.  doi:10.1007/s00024-006-0164-5. 261-308.

Rabinovich,A.B., G.V.Shevchenko and R.E.Thomson. 2007. Sea-ice and current response to the wind: a vector regressional analysis approach. Journal of Atmospheric and Oceanic Technology. 24:1086-1101. 

Rogachev, K., N. Shlyk and E. Carmack. 2007. The shedding of mesoscale anticyclonic eddies from the Alaskan Stream and westward transport of warm water. Deep-Sea Research II: doi:10.1016/j.dsr2.2007.08.017. 

Ross, P.S., C.M. Couillard, M.G. Ikonomou, S.C. Johannessen, M. Lebeuf, R.W. Macdonald and G.T. Tomy. 2007. The provision of scientific advice from Fisheries and Oceans Canada to Environment Canada on polybrominated diphenyl ethers (PBDEs) April 17, 2007. 1-14.

Ross, P.S., G.A. Stern and M. Lebeuf. 2007. Trouble at the top of the food chain: environmental contaminants and health risks in marine mammals. CTRFAS. 2734. 

Schiedek, D., B. Sundelin, J.W. Readman and R.W. Macdonald. 2007. Interactions between climate change and contaminants. Marine Pollution Bulletin. 54(2007):1845-1856. doi: 10.1016/j.marpolbul.2007.09.020. 

Schweigert, J., B. McCarter, T. Therriault, L. Flostrand, C. Hrabok, P.M. Winchell and D.I. Johannessen. 2007. Appendix H: Pelagic Fishes. In: Lucas B. G., Verrin, S. and Brown, R. [Eds.]. Ecosystem overview: Pacific North Coast Integrated Management Area (PNCIMA),  Can. Tech. Rep. Fish. Aquat.Sci. 2667.

Steiner, N., S. Vagle, K.L. Denman and C. McNeil. 2007. Oxygen and nitrogen cycling in the northeast Pacific- Simulations and observations at Station Papa in 2003/2004. Journal of Marine Research. 65:441-469.

Sutherland,T.F., J.Galloway, R.Loschiavo, C.D.Levings and R.Hare. 2007. Calibration techniques and sampling resolution requirements for groundtruthing multibeam acoustic backscatter (EM3000) and QTC VIEWTM classification technology. Estuarine, Coastal and Shelf Science. 75:447-458. 

Tabuchi, M., N. Veldhoen, N. Dangerfield, S.J. Jefferies, C.C. Helbing and P.S. Ross. 2007. PCB-Related Alteration of Thyroid Hormones and Thyroid Hormone Receptor Gene Expression in Free-Ranging Harbor Seals (Phoca vitulina). Environmental Health Perspectives. 114(7):1024-1031.

Thomson, R.E., A.B. Rabinovich and M.V. Krassovski. 2007. Double eopardy: Concurrent Arrival of the 2004 Sumatra Tsunami and Storm-generated Waves on the Atlantic Coast of the United States and Canada. Geophysical Research Letters. 34(L15607). doi:10.1029/2007GL030685.

Thomson, R.E., S.F. Mihaly and E.A. Kulikov. 2007. Estuarine versus transient flow regimes in Juan de Fuca Strait. Journal of Geophysical Research. 112(C09022). doi:10.1029/2006JC003925.

Tierney, K.B., C.R. Singh, P.S. Ross, and C.J. Kennedy. 2007. Relating olfactory neurotoxicity to altered olfactory-mediated behaviours in rainbow trout exposed to three currently-used pesticides. Aquatic Toxicology. 81:55 -64

Tierney, K.B., P.S. Ross, and C.J. Kennedy. 2007. Linuron and carbaryl differentially impair baseline amino acid and bile salt olfactory responses in three salmonids. Toxicology. 231:175-187. 

Timmermans, M.L., H. Melling and L. Rainville. 2007. Dynamics in the deep Canada Basin, Arctic Ocean, inferred by thermistor-chain time series. Journal of Physical Oceanography. 37(4):1066-1076.

Trudel,M., M.Thiess, C.Bucher, E.V.Farley, Jr., B.MacFarlane, E.Casillas, J.Fisher, J.F.T.Morris, J.M.Murphy, and D.W.Welch. 2007. Regional Variation in the Marine Growth and Energy Accumulation of Juvenile Chinook Salmon and coho Salmon along the West Coast of North America. American Fisheries Society. 57: 205-232.

Tsouris, C., P. Syzmcek, P. Taboada-Serrano, S.D. McCallum, P. Brewer, E. Peltzer, P. Walz, E. Adams, A. Chow, W.K. Johnson and J. Summers. 2007. Scaled-up Ocean Injection of CO2-Hydrate Composite particles. Energy and Fuels. 21:3300-3309.

Tsuda, A., S. Takeda, H. Saito, J. Nishioka, I. Kudo, Y. Nojiri, K. Suzuki, M. Uematsu, M.L. Wells, D. Tsumune, T. Yoshimura, T. Aono, T. Aramaki, W.P. Cochlan, M. Hayakawa, K.I  mai, T. Isada, Y. Iwamoto, W.K. Johnson, S. Kameyama, S. Kato, H. Kiyosawa, Y. Kondo, M. Levasseur, R. Machida, I. Nagao, F. Nakagawa, T. Nakanishi, T. Nakatsuka, A. Narita, Y. Noiri, H. Obata, H. Ogasa, K. Oguma, T. Ono, T. Sakuragi, M. Sasakawa, M. Sato, A. Shimamoto, T. Takata, C. Trick, Y.W. Watanabe, C.S. Wong and N.Yoshie. 2007. Evidence for the grazing hypothesis: Grazing reduces phytoplankton responses of the HNLS ecostysem to iron enrichment n the western subarctic pacific (SEEDS II). Journal of Oceanography. 63:983-994.

Veillette, J., J. Sarrazin, J. Gooday, J. Galeron, J.C. Capraise, A. Vangriesheim, J. Etoubleau, J.R.Christian and S.K.Juniper. 2007. Ferromanganese nodule fauna in the Tropical North Pacific Ocean:Species richness, faunal cover and spatial distribution. Deep-Sea Research I. 54:2912-1935.

Verenitch, S.S., A.M.H. deBruym, M.G. Ikonomou and A. Mazumder. 2007. Ion-trap tandem mass spectrometry-based analytical methodology for the determination of polychlorinated biphenyls in fish and shellfish. Performance comparison against electron-capture detection and high-resolution mass spectrometry detection. J.Chrom.A.1142:199-208

Walsh, D., I. Polyakov, L. Timokhov and E. Carmack. 2007. Thermohaline Structure and Variability in the Eastern Nansen Basin as seen from Historial Data. Journal of Marine Research. 65:685-714. 

Whitney, F.A., H.J. Freeland and M. Robert. 2007. Decreasing oxygen levels in the interior waters of the subarctic Pacific. Progress in Oceanography. 75:179-199.  doi:10.1016/j.pocean.2007.08.007. 

Williams, W.J., T. Weingartner and A.J.Hermann. 2007. Idealized 3-dimensional modeling of seasonal variation in the Alaska Coastal Current. Journal of Geophysical Research. 112:C07001. doi:10.1029/2005JC003285.  

Wong, C.S., L. Xie and W.W. Hsieh. 2007. Variations in nutrients, carbon and other hydrographic parameters related to the 1976/77 and 1988/89 regime shifts in the sub-arctic Northeast Pacific. Progress in Oceanography. 75(2):326-342. doi:10.1016/j.pocean.2007.08.002. 

Zhong, L., M. Li and M. Foreman. 2007. Resonance and sea level variability in Chesapeake Bay. Continental Shelf Research. doi:10.1016/j.csr.2008.07.007. 

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Amundrud, T.L., H. Melling, R.G. Ingram and S.E. Allen. 2006. The effect of structure porosity on the melting of ridge keels in pack ice. Journal of Geophysical Research. 111(C06004). doi: 10.1029/2005JC002895.

Atkinson, D.E., R. Brown, B. Alt, T.A. Agnew, J. Bourgeois, M. Burgess, C. Duguay, G. Henry, S. Jeffers, R. Koerner, A.G. Lewkowicz, S. McCourt, H. Melling, M. Sharp, S. Smith, A. Walker, K. Wilson, S. Wolfe, Woo, M-K. and K. Young. 2006. Canadian cryospheric response to an anaomalous warm summer. A synthesis of the Climate Change Action Fund project The State of the Arctic Cryosphere during the Extreme Warm Summer of 1998. Atmosphere-Ocean. 44(4):347-375.

Belmont, M.A., M.G. Ikonomou and C.D. Metcalf. 2006. Presence of nonylphenol ethoxylate surfactants in a watershed in Central Mexico and removal from domestic sewage in a treatment wetland. Environmental Toxicology & Chemistry. 25(1):29-35. 

Brooks, K.M. and D. Stucchi. 2006. The effects of water temperature, salinity, and currents on the survival and distribution of the infective copepodid stage of sea lice (Lepeophtheirus salmonis) originating on Atlantic salmon farms in the Broughton Archipelago of British Columbia, Canada (Brooks 2005) - A response to the rebuttal of Krkosek et al. (2005a). Reviews in Fisheries Science. 14:13-23. doi:10.1080-10641260500448893. 

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Campbell, P.M., M.P. Fernandez, S. Royston, J.L. Smith, P. Poppelen, M.G. Ikonomou and R.H.Devlin. 2006. Male coho salmon (Oncorhynchus kisutch) exposed to a time-course of urban sewage effluent exhibit a sporadic low incidence of sex reversal and intersex. Water Qual.Res. J.of Canada. 41(3):235-243. 

Carmack, E., D.G. Barber, J.R. Christensen, R.W. Macdonald, B. Rudels and E. Sakshaug. 2005. Climate variability and physical forcing of the food webs and the carbon budget on panarctic shelves. Progress in Oceanography. 71:145-181.

Carmack, E. and P. Wassmann. 2006. Food webs and physical-biological coupling on pan-Arctic shelves: Unifying concepts and comprehensive perspectives. Progress in Oceanography. 71:446-477. doi:10.1016/j.pocean.2006.10.004. 

Chamberlain, J., A.M. Weise, M. Dowd and J. Grant. 2006. Modeling approaches to assess the potential effects of shellfish aquaculture on the marine environment. Fisheries and Oceans Canada. Canadian Science Advisory Secretariat Research Document. (2006/032). 

Chen, M., K. Ohman, C.D. Metcalf, M.G. Ikonomou, P.L. Amatya and J. Wilson. 2006. Pharmaceuticals and endocrine disrupting compounds in WWTP effluents and in the water supply system of Calgary. Water Qual.Res.J.of Canada. 41(4):351-364. 

Couillard, C.M., R.W. Macdonald and S.C. Courtenay. 2006. Interactions between toxic chemicals and other environmental factors. a key issue for an effective management of the risk related to toxic chemicals in fish. DFO Toxics - White paper. 97pp. 

Cummins, P.F., L. Armi and S. Vagle. 2006. Upstream internal hydraulic jumps. Journal of Physical Oceanography. 36(5):753-769. 

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Cummins, P.F. and L. Armi. 2006. The influence of boundary layer separation and a lee-side pool of dense fluid on establishment of downslope flows. In: Proceedings of the 6th International Symposium on Stratified Flows. Perth, Australia.

Danon-Schaffer, M., J.R. Grace, R.J. Wenning, M.G. Ikonomou and W.J. Luksemburg. 2006. PBDEs in landfill leachagte and potential for transfer from electronic waste. Organohalogen Compounds. 68:1759-1762. 

Denman, K.L., C. Voelker, A. Peña and R. Rivkin. 2006. Modelling the ecosystem response to iron fertilization in the subarctic NE Pacific: The influence of grazing, and Si and N cycling on CO2 drawdown. Deep-Sea Research II. 53:2327-2352.doi:10.1016/j.dsr2.2006.05.026. 

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Dunton, K.H., T. Weingartner and E. Carmack. 2006. The Nearshore Beaufort Sea Ecosystem. Sources and Fate of Terrestrial Carbon in Arctic Coastal Food Webs. Progress in Oceanography. 71:362-378. 

Foreman, M., D. Stucchi, Y. Zhang and A.M. Baptista. 2006. Estuarine and tidal currents in the Broughton Archipelago. Atmosphere-Ocean. 44(1):47-63. 

Freeland, H.J. 2006. How much water from the North Pacific Current finds its way into the Gulf of Alaska? Atmosphere-Ocean. 44(4):321-330.

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Gower, J. and F. González. 2006. U.S. Warning System Detected the Sumatra Tsunami. Eos Trans. AGU. 87(10):105-108. 

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Grebmeier, J.M., J. Overland, S.E. Moore, E.V. Farley, Jr., E. Carmack, L.W. Cooper, K. Frey, J.H. Helle, F.A. McLaughlin and S.L. McNutt. 2006. A major ecosystem shift in the Northern Bering Sea. Science. 311:1461-1464. doi:10.1126/science.1121365. 

Guo, L. and R.W. Macdonald. 2006. Source and transport of terrigenous organic matter in the upper Yukon River. Evidence from isotope (d13C, 14C, d15N) composition of dissolved, colloidal and particulate phases. Global Biogeochemical Cycles. 20(GB2011). doi:10.1029/2005GB002593. 

Harner, T., M. Shoeib, L.M. Diamond, M.G. Ikonomou and G.A. Stern. 2006. Passive sampler derived air concentrations of PBDEs along an urban rural transect: spatial and temporal trends. Chemosphere. 64:262-267. 

Holloway, G. 2006. Statistically stationary differential diffusion in a large-scale internal waves-vortical modes environment. Deep-Sea Research II. 53:116-127. doi:10.1016/j.dsr2.2005.09.012. 

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Ikonomou, M.G., M.P. Fernandez and Z. Hickman. 2006. Spatio-temporal and species-specific variation in PBDE patterns in British Columbia's coastal waters: evidence of in-vivo biotransformation in wildlife. Environ.Pollution. 140(2):355-363. 

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Levasseur, M., M.G. Scarratt, S. Michaud, A. Merzouk, C.S. Wong, M.D. Arychuk, W.A. Richardson, E. Wong, A. Marchetti and H.Kiyosawa. 2006. DMSP and DMS dynamics during a mesoscale iron fertilization experiments in the NE Pacific. Part I. Temporal and vertical distributions. Deep-Sea Research II. 53:2353-2369. 

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Mackas, D.L., P.T. Strub, A. Thomas and V. Montecino. 2006. Eastern ocean boundaries. In: Robinson, A. R. and Brink, K. H. [Eds.]. The Sea XIV. The Global Coastal Ocean, Interdisciplinary Regional Studies and Syntheses. 2:21-59. 

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Meylan, M.H. and D. Masson. 2006. A linear Boltzmann equation to model wave scattering in the marginal ice zone. Ocean Modelling. 11(3-4):417-427. 

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Münchow, A., H. Melling and K.K. Falkner. 2006. An observational estimate of volume and freshwater flux leaving the Arctic Ocean through Nares Strait. Journal of Physical Oceanography. 36:2025-2041. 

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O'Brien, M.C., R.W. Macdonald, H. Melling and K.Iseki. 2006. Particle fluxes and geochemistry on the Canadian Beaufort Shelf: Implications for sediment transport and deposition. Continental Shelf Research. 26(1):41-81

Paull, C.K., W. Ussler III, S.R. Dallimore, S.M. Blasco, T.D. Lorenson, H. Melling, B.E. Medioli, F.M. Nixon and F. McLaughlin. 2006. Origins of pingo-like features on the Beaufort Sea shelf and their possible relationship to decomposing gas hydrates. Geophysical Research Letters. 34(L1603). doi:10.1029/2006GL027977.

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Samelson, R.M., T.A. Agnew, H. Melling and A. Münchow. 2006. Evidence for atmospheric control of sea-ice motion through Nares Strait. Geophysical Research Letters. 33(L02506). doi:10.1029/2005GL025016.

Sather, P., M.G. Ikonomou and K. Haya. 2006. Occurrence of persistent organic pollutants in sediments collected near fish farm sites. Aquaculture. 254:234-247. 

Shimada, K., T. Kamoshida, M. Itoh, S. Nishino, E. Carmack, F. McLaughlin, S. Zimmermann and A. Proshutinsky. 2006. Pacific ocean inflow: influence on catastrophic reduction of sea ice cover in the Arctic Ocean. Geophysical Research Letters. 33(L08605). doi:10.1029/2005GL025624.

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